PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pta009629
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pinus; Pinus
Family LBD
Protein Properties Length: 258aa    MW: 28073.2 Da    PI: 6.711
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-157a-Pinus_taeda-5732PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26046.11.4e-14261022395
     DUF260  23 paeqpkkfanvhklFGasnvlkllkalpeeer....edamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                p++q++++a+++k++G++ +++l+ + pe+ r     +++ssl+y A+ r+ dP+ G+vg++ +++++++q+ +e  
  Pta009629  26 PESQANATAFLAKFYGRTGLMNLICNGPEHLRpvigAAMFSSLLYDACGRMLDPIFGSVGLVGSGNWEVCQAGVESI 102
                899*****************************88878899*******************************988765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031953.3E-926100IPR004883Lateral organ boundaries, LOB
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    Send to blast
MAVESSERAA ANPAFSGPAS NGXRSPESQA NATAFLAKFY GRTGLMNLIC NGPEHLRPVI  60
GAAMFSSLLY DACGRMLDPI FGSVGLVGSG NWEVCQAGVE SILRGNSASH VVPMEAMAGD  120
LHRVKTKDRF KHVSRAKPRQ KQRKSALLNN HIVSRSKSDG WCDVTNSLQG AAPENGKSNT  180
EQERNEFVTA DEAEMKYSHD LIWNLETSHP EAEAPFDAVK LELTLGYEGS TSPTRILLAD  240
NLRCSETHSS QCTERYLP
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Pta.189980.0root